Data-driven structural life sciences

Masahide Kikkawa
Graduate School of Medicine
Professor
Data-driven structural life science is a discipline that obtains large amounts of structural and dynamics information at the level of biomolecules, cells, tissues, and organs. Such information is essential for the Graduate Schools of Medicine, Sciences, Pharmaceutical Sciences, just as well as the Institute for Quantitative Life Sciences. Until recently, typical “structural biology” has mainly elucidated structures of biomolecules at the atomic level. However, structural life science is a cross-scale field that ranges from molecules to organs. Therefore, this project will promote combining various microscopes that allow for the collection of large amounts of data with high throughput. For example, a cryo-electron microscope collects several terabytes of data per day. To derive the structure from this data without bias and to use it for the elucidation of the underlying mechanisms of life phenomena and drug discovery, we would also promote data-driven life science using supercomputer systems, such as a large computer such as Wisteria/BDEC-01
Titan Krios G4i
Nature 2021 590:163-169

Related links

Related publications

Cryo-Electron Microscopy Methodology: Current Aspects and Future Directions. Danev, R., Yanagisawa, H., Kikkawa, M. Trends Biochem Sci 2019 44:837-848

SDGs

  • SDG3 Ensure healthy lives and promote well-being for all at all ages
  • SDG4 Ensure inclusive and equitable quality education and promote lifelong learning opportunities for all
  • SDG17 Strengthen the means of implementation and revitalize the global partnership for sustainable development

Contact

  • Kazuhiko Nakamura
  • ex. 23339
  • Tel: +81-3-5841-3339
  • Email: nakamurakz[at]m.u-tokyo.ac.jp
    ※[at]=@
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